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Petrov, Tatjana

News

- Lab relocates to TU Darmstadt, Germany with 01/2014

- Christoph and Jakob Ruess receive the SIB best graduate paper award 2012 for their work published in PNAS (details).

- Team BISON ranked 3rd in the 2012 SBV IMPROVER CHALLENGE Challenge on the prediction of Diagnostic Signatures.

- ETH Life published an article on our recent work.

more News

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2013 DREAM 8 Challenges closed!

The three DREAM8 Challenges on Breast Cancer Network Inference, Toxicogenetics and Whole-Cell Parameter Estimation were open for participation from June 10 to September 15, 2013:

Click here to learn more about DREAM 8

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Master Thesis at IBM

Contact us to learn more about possible Master Thesis projects at IBM Research.

Book

sysbio_book

Published in May 2011 by Springer Verlag.  

Tatjana Petrov


Tatjana Petrov
BISON Group
ETL I 15
Physikstrasse 3
8092 Zurich Zurich
SWITZERLAND

Phone: +41 44
Fax: +41 44 632 1211

I finished my PhD in June 2013 and am now working as a postdoctoral fellow at IST Austria. Visit my new web-page!

I am a PhD student within the SystemsX project since February 2009, supervised by Heinz Koeppl and co-advised by Tom Henzinger. During my exciting PhD life, I spent a semester at Harvard Medical School, under the supervision of Walter Fontana. Previously, I attended the Doctoral Program in Computer and Communication Sciences at EPFL, immediately after graduating with a M.Sc. degree in Computer Science in September 2007, from the Faculty of Sciences, University of Novi Sad.

Following the master work in theoretical computer science and a diploma work on random graphs, I started a PhD in the area of formal verification, in particular in model checking, infinite games on graphs, interface theories, and embedded systems design. I got interested in using these theories to better understand the highly complex signaling pathways in cells. Given the set of biological hypothesis, written as a computer program (for example, in Kappa), my mission is to develop techniques for automatic reductions of stochastic behaviour of such programs.

Some Publications

Student projects

Query language for rule-based models, on SiROP (available)

Modeling signaling pathways with Kappa: Some case studies (student: Eirini Arvaniti, fall semester 2012)

Abstractions of rule-based models: Which information is still available? (student: Marica Stojanov, summer internship 2011)

 

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© 2016 ETH Zurich | Imprint | 18 December 2013
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